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Computational Biology


Importing Data - Featuring Bioinformatics Toolbox

  Connecting to Local Databases
  Working with Affymetrix Gene Chip data
 

Analyzing and Visualizing Data - Featuring Bioinformatics Toolbox

  Pre-Processing Raw Mass Spectrometry Data
  Identifying Significant Features and Classifying Protein Profiles
  Visually Representing Interconnected Data
  Working with the Clustergram Function
  Microarray Data Visualization
  Microarray Cluster Analysis
  Exploring Primer Design
  Basic Example of Sequence Alignment
  Analyzing the Origin of the Human Immunodeficiency Virus
 

Modeling Biological Systems - Featuring SimBiology

  Stochastic Simulation of Radioactive Decay
  Stochastic Simulation of Lotka-Volterra Reactions
  Comparing SSA and Explicit Tau-Leaping Stochastic Solvers
  Yeast Heterotrimeric G Protein Cycle
 

Communicating Results - Featuring Bioinformatics Toolbox and MATLAB

  Calling BioPerl Functions from MATLAB
  Example of Using BioJava from within MATLAB
  Creating a GUI with GUIDE (10 min, 37 sec) (MATLAB)
  Publishing M Code from the Editor (4 min, 36 sec) (MATLAB)
 

Increasing Computing Performance - Featuring Bioinformatics Toolbox

  Batch Processing of Spectra Using Distributed Computing
  Bootstrapping Phylogenetic Trees

Trial Software Available

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